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  • Open Access

    ARTICLE

    Genome-Wide Analysis for Yield-Related Agronomic and Biochemical Traits of Chinese and Bangladeshi Grass Pea Genotypes Using SSR Markers

    Md. Mosiur Rahman1,2, Md. Ruhul Quddus3, Quanle Xu4, Muhammad Malek Hossain2, Rong Liu1, Mengwei Li1, Xin Yan1, Guan Li1, Yishan Ji1, Chenyu Wang1, Ashutosh Sarker5, Tao Yang1, Xuxiao Zong1, Md. Monoar Hossain6, Saleh Alfarraj7, Mohammad Javed Ansari8, Sagar Maitra9,*, Akbar Hossain10,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.8, pp. 1781-1804, 2024, DOI:10.32604/phyton.2024.048992 - 30 August 2024

    Abstract Grass pea (Lathyrus sativus L.) is an imperative food crop cultured in dryland agricultural ecology. It is a vital source of dietary protein to millions of populaces living in low-income countries in South-East Asia and Africa. This study highlights the improvement of genomic properties and their application in marker-trait relationships for 17 yield-related characters in 400 grass pea genotypes from China and Bangladesh. These characters were assessed via 56 polymorphic markers using general linear model (GLM) (P+G+Q) and mixed linear model (MLM) (P+G+Q+K) in the tassel software based on the linkage disequilibrium and population structure analysis.… More >

  • Open Access

    ARTICLE

    Genetic Variability and Phenotypic Correlations Study among Grain Quality Traits and Mineral Elements Concentrations in Colored and Non-Colored Rice (Oryza sativa L.)

    Adel A. Rezk1,2,*, Mohamed M. El-Malky3, Heba I. Mohamed4,*, Hossam S. El-Beltagi1,5

    Phyton-International Journal of Experimental Botany, Vol.93, No.7, pp. 1733-1748, 2024, DOI:10.32604/phyton.2024.052739 - 30 July 2024

    Abstract Twenty-four rice genotypes were examined to assess genetic variability, heritability, and correlations for seven-grain quality traits, eight nutritional elements, and protein. ANOVA revealed significant differences for the quality traits studied. For every trait under study, the phenotypic coefficient of variation was higher than the correspondence genotypic coefficient of variation. Heritability in a broad sense varied from 29.75% for grain length to 98.31% for the elongation trait. Hulling percentage recovery had a highly significant positive correlation with milling and head rice percentage. Consequently, milling percentage had a highly positive correlation with head rice percentage. In amylose… More >

  • Open Access

    ARTICLE

    Selenium Differentially Regulates Flavonoid Accumulation and Antioxidant Capacities in Sprouts of Twenty Diverse Mungbean ( (L.) Wilczek) Genotypes

    Fenglan Zhao1, Jizhi Jin1, Meng Yang1, Franklin Eduardo Melo Santiago2, Jianping Xue1, Li Xu3,*, Yongbo Duan1,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.3, pp. 611-625, 2024, DOI:10.32604/phyton.2024.048295 - 28 March 2024

    Abstract

    Seed germination with selenium (Se) is promising for producing Se-biofortified foods. Mungbean (Vigna radiata (L.) Wilczek) sprout is freshly eaten as a salad dressed with sauce, making it superior for Se biofortification. Since the Se safety range for the human body is extremely narrow, it is imperative to evaluate the genotypic responses of mungbean sprouts to Se. This study evaluated the Se enrichment capacity and interaction with flavonoids and antioxidant systems in sprouts of 20 mungbean germplasms. Selenium treatment was done by immersing mungbean seeds in 20 μM sodium selenite solution for 8 h. Afterward, the

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  • Open Access

    REVIEW

    A broad overview of genotype imputation: Standard guidelines, approaches, and future investigations in genomic association studies

    MIRKO TRECCANI*, ELENA LOCATELLI, CRISTINA PATUZZO, GIOVANNI MALERBA*

    BIOCELL, Vol.47, No.6, pp. 1225-1241, 2023, DOI:10.32604/biocell.2023.027884 - 19 May 2023

    Abstract The advent of genomic big data and the statistical need for reaching significant results have led genome-wide association studies to be ravenous of a huge number of genetic markers scattered along the whole genome. Since its very beginning, the so-called genotype imputation served this purpose; this statistical and inferential procedure based on a known reference panel opened the theoretical possibility to extend association analyses to a greater number of polymorphic sites which have not been previously assayed by the used technology. In this review, we present a broad overview of the genotype imputation process, showing More >

  • Open Access

    ARTICLE

    Estimation of Genetic Divergence and Character Association Studies in Local and Exotic Diversity Panels of Soybean (Glycine max L.) Genotypes

    Syed Ali Zafar1,*, Muhammad Aslam2, Haroon Zaman Khan3, Sehrish Sarwar1, Rao Saad Rehman4, Mariam Hassan1, Ramala Masood Ahmad2, Rafaqat A. Gill5, Basharat Ali6, Ibrahim Al-Ashkar7, Abdullah Ibrahim7, Md Atikur Rahman8, Ayman El Sabagh9,*

    Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1887-1906, 2023, DOI:10.32604/phyton.2023.027679 - 11 April 2023

    Abstract The availability of favorable genetic diversity is a thriving vitality for the success of a breeding program. It provides a firm basis of selecting superior breeding lines for the development of high yielding crop genotypes. In this context, present investigation aimed to generate information on genetic divergence and character association in a diversity panel of 123 local and exotic soybean genotypes. Analysis of variance revealed significant response of the evaluated genotypes based on studied attributes. It depicted the probability of selecting desirable soybean genotypes by focusing on character association studies and genetic diversity analysis. Correlation… More >

  • Open Access

    ARTICLE

    Are the two polymorphic sites of anti-Marek’s disease in White Leghorn chickens also suitable for Partridge Shank chickens?

    WENQING LI1, WANLI LI2,3, BEI WANG1, LIN ZHANG1, SHENGLI LI3, CHENWAN LI1, PINHUI WU1, GUOQING YANG1, GUOZHI ZHANG1,*

    BIOCELL, Vol.47, No.5, pp. 1127-1134, 2023, DOI:10.32604/biocell.2023.027863 - 10 April 2023

    Abstract Background: The selection of Marek’s disease (MD)-resistant breeds in Partridge Shank chicken, a popular local chicken breed in Henan Province of China, has practical value. We hypothesized that the two polymorphic sites (rs14527240 located in SMOC1 and GGaluGA156129 located in PTPN3) related to MD resistance in White Leghorn chickens are also applicable to Partridge Shank chickens. Methods: In this experiment, we screened 10 live hens and 2 live roosters with the double GG genotype by genotyping the two sites from 6500 Partridge Shank chickens. Nineteen one-day-old chicks with the double GG genotype were obtained by artificial insemination. Seventy-two one-day-old… More >

  • Open Access

    ARTICLE

    Response of Contrasting Rice Genotypes to Zinc Sources under Saline Conditions

    Muhammad Jan1,*, Muhammad Anwar-Ul-Haq2, Talha Javed3, Sadam Hussain4,*, Ilyas Ahmad5, Muhammad Ashraf Sumrah6, Javed Iqbal7, Babar Hussain Babar8, Aqsa Hafeez9, Muhammad Aslam5, Muhammad Tahir Akbar10, Marjan Aziz6, Khadiga Alharbi11, Izhar Ullah12

    Phyton-International Journal of Experimental Botany, Vol.92, No.5, pp. 1361-1375, 2023, DOI:10.32604/phyton.2023.026620 - 09 March 2023

    Abstract Abiotic stresses are among the major limiting factors for plant growth and crop productivity. Among these, salinity is one of the major risk factors for plant growth and development in arid to semi-arid regions. Cultivation of salt tolerant crop genotypes is one of the imperative approaches to meet the food demand for increasing population. The current experiment was carried out to access the performance of different rice genotypes under salinity stress and Zinc (Zn) sources. Four rice genotypes were grown in a pot experiment and were exposed to salinity stress (7 dS m−1), and Zn (15… More >

  • Open Access

    ARTICLE

    Enhancement of Ultrasonic Seed Treatment on Yield, Grain Quality Characters, and 2-Acetyl-1-Pyrroline Biosynthesis in Different Fragrant Rice Genotypes

    Rujian Lan1,2,3,#, Meiyang Duan1,2,3,#, Feida Wu1,2,3,#, Rifang Lai1,2,3, Zhaowen Mo1,2,3, Shenggang Pan1,2,3, Xiangru Tang1,2,3,*

    Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2461-2473, 2022, DOI:10.32604/phyton.2022.021884 - 12 July 2022

    Abstract Fragrant rice is popular for the good grain quality and special aroma. The present study conducted a field experiment to investigate the effects of ultrasonic seed treatment on grain yield, quality characters, physiological properties and aroma biosynthesis of different fragrant rice genotypes. The seeds of three fragrant rice genotypes were exposed to 1 min of ultrasonic vibration and then cultivated in paddy field. The results of present study showed that ultrasonic seed treatment increased grain yield of all fragrant rice genotypes but the responses of yield formation to ultrasonic were varied with different genotypes. Compared with More >

  • Open Access

    ARTICLE

    Rice (Oryza sativa L.) Breeding among Hassawi Landrace and Egyptian Genotypes for Stem Borer (Chilo agamemnon Bles.) Resistance and Related Quantitative Traits

    Mohammed I. Al-Daej1, Mohamed M. El-Malky2, Muhammad N. Sattar3, Adel A. Rezk1,4, Muhammad N. Naqqash5, Jameel M. Al-Khayri1,*

    Phyton-International Journal of Experimental Botany, Vol.91, No.9, pp. 1905-1922, 2022, DOI:10.32604/phyton.2022.020629 - 13 May 2022

    Abstract Rice stem borer (Chilo agamemnon Bles.) is a primary insect pest of rice and is a major limiting factor to rice production. Breeding for insect-resistant crop varieties has been an economic way of integrated pest management (IPM) as it offers a viable and ecologically acceptable approach. This study was aimed to evaluate rice genotypes for their resistance against rice stem borer. Seven parental genotypes with twenty one F1 crosses were evaluated for genotypic variation in field experiments. Analysis of variance revealed significant differences for the studied traits in almost all crosses and parents. In addition, the… More >

  • Open Access

    ARTICLE

    Effect of Cadmium Stress on the Growth, Physiology, Stress Markers, Antioxidants and Stomatal Behaviour of Two Genotypes of Chickpea ( Cicer arietinum L.)

    Sayyada Bushra1, Shahla Faizan1, Zeenat Mushtaq1, Alisha Hussain1, Khalid Rehman Hakeem2,3,4,*

    Phyton-International Journal of Experimental Botany, Vol.91, No.9, pp. 1987-2004, 2022, DOI:10.32604/phyton.2022.019957 - 13 May 2022

    Abstract

    The current work was performed to know the impact of cadmium (Cd) toxicity on two different genotypes of chickpea (Cicer arietinum L.) namely Pusa-BG1053 and Pusa-BG372. Cadmium was applied in the form of cadmium chloride (CdCl2), in varying levels, 0, 25, 50, 75, and 100 mg Cd kg-1 soil. Plant growth as well as physiological attributes were decreased with increasing concentration of Cd. Both genotypes showed the maximum and significant reduction at the maximum dose of Cd (100 mg Cd kg-1 soil). Results of this study proved that the genotype Pusa-BG1053 was more tolerant and showed a lower

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