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  • Open Access

    ARTICLE

    Genome-Wide Identification and Expression Analysis of GS and GOGAT Gene Family in Pecan (Carya illinoinensis) under Different Nitrogen Forms

    Zhenbing Qiao1,2, Mengyun Chen1,2, Wenjun Ma1,2, Juan Zhao1,2, Jiaju Zhu1,2, Kaikai Zhu1,2, Pengpeng Tan1,2, Fangren Peng1,2,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.9, pp. 2349-2365, 2024, DOI:10.32604/phyton.2024.056655 - 30 September 2024

    Abstract Ammonium nitrogen (NH4+-N) is one of the main forms of nitrogen absorbed and utilized by plants, and mastering the regulatory mechanism of plant ammonium assimilation is a key way to improve the efficiency of plant nitrogen utilization. Glutamine synthetase (GS) and glutamate synthase (GOGAT), two key enzymes for ammonium assimilation, have rarely been studied in pecan. In this study, GS and GOGAT family members of pecan were identified and analyzed using bioinformatics methods. The results indicated that 6 GS and 4 GOGAT genes were identified. The cis-acting elements can be broadly categorized into light-responsive, hormone-responsive, and stress-responsive elements.… More >

  • Open Access

    ARTICLE

    Genome-Wide Identification of the MYB Gene Family and Screening of Potential Genes Involved in Fatty Acid Biosynthesis in Walnut

    Dongxue Su1, Jiarui Zheng1, Yuwei Yi1, Shuyuan Zhang1, Luxin Feng1, Danzeng Quzhen2, De Qiong3, Weiwei Zhang1, Qijian Wang1, Feng Xu1,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.9, pp. 2317-2337, 2024, DOI:10.32604/phyton.2024.055350 - 30 September 2024

    Abstract The multifaceted roles of MYB transcriptional regulators are pivotal in orchestrating the complex processes of secondary metabolism, stress tolerance mechanisms, and life cycle progression and development. This study extensively examined the JrMYB genes using whole genome and transcriptomic data, focusing on identifying putative MYB genes associated with fatty acid metabolism. 126 MYB genes were identified within the walnut genome, characterized by hydrophilic proteins spanning lengths ranging from 78 to 1890 base pairs. Analysis of cis-acting elements within the promoter regions of MYB genes revealed many elements linked to cell development, environmental stress, and phytohormones. Transcriptomic data was utilized… More > Graphic Abstract

    Genome-Wide Identification of the <i>MYB</i> Gene Family and Screening of Potential Genes Involved in Fatty Acid Biosynthesis in Walnut

  • Open Access

    ARTICLE

    The Relationship between Parental Stress and Child Conformity: The Mediating Role of Resilience

    Houyan Li1,2, Guandong Song1,*, Bin Xiao1,*

    International Journal of Mental Health Promotion, Vol.26, No.9, pp. 767-776, 2024, DOI:10.32604/ijmhp.2024.054545 - 20 September 2024

    Abstract Background: In today’s society, parental stress has become a prevalent and significant issue, impacting not only parents’ mental health but also potentially profoundly affecting children’s growth and education. This topic has garnered continuous attention from scholars. The present study aims to delve into the relationship between parental stress and children’s behavior, particularly focusing on children’s conformity and discipline development during crucial stages. This study aims to explore the relationship between parental stress, child conformity, and resilience, and further examines the mediating role of resilience in the relationship between parental stress and child conformity. Methods: We… More >

  • Open Access

    ARTICLE

    The Mediating and Moderating Effects of Family Resilience on the Relationship between Individual Resilience and Depression in Patients with Breast Cancer

    Youqi Jiang1,#, Bing Wu2,#, Jiahui Chen3, Ruyi Jin3, Guangshan Jin3, Minhao Zhang4, Qin Zhou4,*, Aiji Jiang2,*

    Psycho-Oncologie, Vol.18, No.3, pp. 191-200, 2024, DOI:10.32604/po.2024.053942 - 12 September 2024

    Abstract Objective: This study evaluated the effect of resilience on depression among patients with breast cancer from individual and familial perspectives by exploring the mediating and moderating effects of family resilience between individual resilience and depression. Methods: A questionnaire survey was conducted among 337 patients with breast cancer who were admitted to the Oncology Department of Jiangsu Province Hospital. The survey included demographic information, the Connor–Davidson Resilience Scale (CD-RISC), the Family Resilience Assessment Scale (FRAS), and the Chinese version of the Patient Health Questionnaire-9 (PHQ-9) for Depression. The relationship among individual resilience, family resilience, and depression… More >

  • Open Access

    ARTICLE

    Genome-Wide Identification of ABCC Gene Subfamily Members and Functional Analysis of CsABCC11 in Camellia sinensis

    Mingyuan Luo1, Shiyu Tian1, Xinzhuan Yao2, Yue Wan4, Zhouzhuoer Chen1, Zifan Yang4, Huagen Hao4, Fei Liu3, Hu Tang1,2,*, Litang Lu1,2,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.8, pp. 2019-2036, 2024, DOI:10.32604/phyton.2024.052938 - 30 August 2024

    Abstract The ATP-binding cassette (ABC) transporter is a gene superfamily in plants. ATP-binding cassette subfamily C (ABCC) protein is a multidrug resistance-associated (MRP) transporter. They play various roles in plant growth, development, and secondary metabolite transport. However, there are few studies on ABCC transporters in tea plants. In this study, genome-wide association study (GWAS) analysis of epigallocatechin gallate (EGCG) content in 108 strains of Kingbird revealed that CsABCCs may be involved in EGCG transport. We identified 25 CsABCC genes at the genomic level of the tea plant, their phylogenetic tree, gene structure, targeted miRNA and other bioinformatics… More >

  • Open Access

    ARTICLE

    Genome-Wide Identification and Expression Analysis of the GSK3 Gene Family in Sunflower under Various Abiotic Stresses

    Xianwen Ji#, Ziying Jiang#, Jichao Wang, Lili Dong, Xinyi Deng*

    Phyton-International Journal of Experimental Botany, Vol.93, No.8, pp. 1839-1850, 2024, DOI:10.32604/phyton.2024.052809 - 30 August 2024

    Abstract Genes in the glycogen synthase kinase 3 (GSK3) family are essential in regulating plant response to stressful conditions. This study employed bioinformatics to uncover the GSK3 gene family from the sunflower genome database. The expressions of GSK3 genes in different tissues and stress treatments, such as salt, drought, and cold, were assessed using transcriptome sequencing and quantitative real-time PCR (qRT-PCR). The study results revealed that the 12 GSK3 genes of sunflower, belonging to four classes (Classes I–IV), contained the GSK3 kinase domain and 11–13 exons. The majority of GSK3 genes were highly expressed in the leaf axil and… More >

  • Open Access

    ARTICLE

    Identification and Analysis of the WRKY Transcription Factor Gene Family in Verbena bonariensis

    Dandan Yuan, Ju Cai, Tao Zhang, Sisi Wang, Xiuliu Yang, Yan Li*

    Phyton-International Journal of Experimental Botany, Vol.93, No.8, pp. 1875-1896, 2024, DOI:10.32604/phyton.2024.052190 - 30 August 2024

    Abstract The WRKY transcription factor gene family is one of the unique gene families in plants. It plays an important role in response to abiotic stresses such as cold and drought, hormone signal transduction, regulation of biosynthesis, leaf senescence seed germination, etc. However, little information is available about WRKY transcription factors in Verbena bonariensis. In this study, 70 VbWRKY genes were identified from the whole genome. The phylogenetic analysis of the WRKY gene family in V. bonariensis and Arabidopsis shows that the WRKY genes in V. bonariensis can be divided into three groups: I, II, and III, which contain 13, 47, and… More >

  • Open Access

    ARTICLE

    Genome-Wide Discovery and Expression Profiling of the SWEET Sugar Transporter Gene Family in Woodland Strawberry (Fragaria vesca) under Developmental and Stress Conditions: Structural and Evolutionary Analysis

    Shoukai Lin1,3,4,*, Yifan Xiong2, Shichang Xu1,2, Manegdebwaoaga Arthur Fabrice Kabore2, Fan Lin5, Fuxiang Qiu1,2,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.7, pp. 1485-1502, 2024, DOI:10.32604/phyton.2024.050990 - 30 July 2024

    Abstract The SWEET (sugar will eventually be exported transporter) family proteins are a recently identified class of sugar transporters that are essential for various physiological processes. Although the functions of the SWEET proteins have been identified in a number of species, to date, there have been no reports of the functions of the SWEET genes in woodland strawberries (Fragaria vesca). In this study, we identified 15 genes that were highly homologous to the A. thaliana AtSWEET genes and designated them as FvSWEET1FvSWEET15. We then conducted a structural and evolutionary analysis of these 15 FvSWEET genes. The phylogenetic analysis enabled us… More >

  • Open Access

    ARTICLE

    Bayesian and Non-Bayesian Analysis for the Sine Generalized Linear Exponential Model under Progressively Censored Data

    Naif Alotaibi1, A. S. Al-Moisheer2, Ibrahim Elbatal1, Mohammed Elgarhy3,4, Ehab M. Almetwally1,5,*

    CMES-Computer Modeling in Engineering & Sciences, Vol.140, No.3, pp. 2795-2823, 2024, DOI:10.32604/cmes.2024.049188 - 08 July 2024

    Abstract This article introduces a novel variant of the generalized linear exponential (GLE) distribution, known as the sine generalized linear exponential (SGLE) distribution. The SGLE distribution utilizes the sine transformation to enhance its capabilities. The updated distribution is very adaptable and may be efficiently used in the modeling of survival data and dependability issues. The suggested model incorporates a hazard rate function (HRF) that may display a rising, J-shaped, or bathtub form, depending on its unique characteristics. This model includes many well-known lifespan distributions as separate sub-models. The suggested model is accompanied with a range of More >

  • Open Access

    ARTICLE

    Comparative and Phylogenetic Analysis of the Complete Chloroplast Genomes of 19 Species in Rosaceae Family

    Riwa Mahai1, Rongpeng Liu1, Xiaolang Du1, Zejing Mu1, Xiaoyun Wang1,*, Jun Yuan2,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.6, pp. 1203-1219, 2024, DOI:10.32604/phyton.2024.051559 - 27 June 2024

    Abstract Rosaceae represents a vast and complex group of species, with its classification being intricate and contentious. The taxonomic placement of many species within this family has been a subject of ongoing debate. The study utilized the Illumina platform to sequence 19 plant species from 10 genera in the Rosaceae. The cp genomes, varying in size from 153,366 to 159,895 bp, followed the typical quadripartite organization consisting of a large single-copy (LSC) region (84,545 to 87,883 bp), a small single-copy (SSC) region (18,174 to 19,259 bp), and a pair of inverted repeat (IR) regions (25,310 to… More >

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