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    ARTICLE

    Analysis of Intraspecies Diversity of Rice Reveals Variation Patterns of Oryza sativa Basic Leucine Zippers

    Jing Wang1,#, Wenqing Xiao1,#, Qingnan Wang1, Xu Wang1, Bin Jiang1, Yangchun Han2, Yang Sun1,*

    Phyton-International Journal of Experimental Botany, Vol.93, No.5, pp. 859-873, 2024, DOI:10.32604/phyton.2024.048151

    Abstract The basic leucine zipper (bZIP) is an important class of transcription factors in plants, playing a critical role in plant growth and development and responses to biotic and abiotic stress. Due to gene presence/absence variations, it is limited to identify bZIP genes based on the reference genome. Therefore, we performed the bZIP gene family analysis in the rice pan-genome. By employing a rice pan-genome, ninety-four OsbZIPs (72 core genes and 22 variable genes) were identified and divided into 11 groups in a phylogenetic tree. Based upon Ka/Ks values in 33 accessions, OsbZIPs were subjected to different selection… More >

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