WEITAO ZHENG¹, DONG JIANG², SONGEN CHEN¹, MEILING WU¹, BAOQI YAN², JIAHUI ZHAI², YUNQIANG SHI², BIN XIE¹, XINGWANG XIE², KANGHONG HU^1,*, WENXUE MA^3,*

Oncology Research, Vol.32, No.12, pp. 1837-1850, 2024, DOI:10.32604/or.2024.056565 - 13 November 2024

Abstract Objectives: The Kirsten rat sarcoma virus (KRAS) G12D oncogenic mutation poses a significant challenge in treating solid tumors due to the lack of specific and effective therapeutic interventions. This study aims to explore innovative approaches in T cell receptor (TCR) engineering and characterization to target the KRAS G12D_7-16 mutation, providing potential strategies for overcoming this therapeutic challenge. Methods: In this innovative study, we engineered and characterized two T cell receptors (TCRs), KDA11-01 and KDA11-02 with high affinity for the KRAS G12D_7-16 mutation. These TCRs were isolated from tumor-infiltrating lymphocytes (TILs) derived from tumor tissues of patients More >

Muhammad Tashfeen¹, Fazal Dayan¹, Muhammad Aziz ur Rehman¹, Thabet Abdeljawad^2,3,4,5,*, Aiman Mukheimer²

CMES-Computer Modeling in Engineering & Sciences, Vol.141, No.3, pp. 2527-2554, 2024, DOI:10.32604/cmes.2024.056269 - 31 October 2024

Abstract Foot-and-mouth disease (FMD) is a viral disease that affects cloven-hoofed animals including cattle, pigs, and sheep, hence causing export bans among others, causing high economic losses due to reduced productivity. The global effect of FMD is most felt where livestock rearing forms an important source of income. It is therefore important to understand the modes of transmission of FMD to control its spread and prevent its occurrence. This work intends to address these dynamics by including the efficacy of active migrant animals transporting the disease from one area to another in a fuzzy mathematical modeling… More >

Muhammad Tashfeen¹, Fazal Dayan¹, Muhammad Aziz Ur Rehman¹, Thabet Abdeljawad^2,3,4,5,*, Aiman Mukheimer²

CMES-Computer Modeling in Engineering & Sciences, Vol.141, No.2, pp. 1419-1446, 2024, DOI:10.32604/cmes.2024.053242 - 27 September 2024

Abstract This study analyzes the transmission of typhoid fever caused by Salmonella typhi using a mathematical model that highlights the significance of delay in its effectiveness. Time delays can affect the nature of patterns and slow down the emergence of patterns in infected population density. The analyzed model is expanded with the equilibrium analysis, reproduction number, and stability analysis. This study aims to establish and explore the non-standard finite difference (NSFD) scheme for the typhoid fever virus transmission model with a time delay. In addition, the forward Euler method and Runge-Kutta method of order 4 (RK-4)… More >

GERHARD HAMILTON^*, MARIE-THERESE EGGERSTORFER, SANDRA STICKLER

Oncology Research, Vol.32, No.8, pp. 1257-1264, 2024, DOI:10.32604/or.2024.051653 - 17 July 2024

Abstract The Kirsten rat sarcoma virus—son of sevenless 1 (KRAS-SOS1) axis drives tumor growth preferentially in pancreatic, colon, and lung cancer. Now, KRAS G12C mutated tumors can be successfully treated with inhibitors that covalently block the cysteine of the switch II binding pocket of KRAS. However, the range of other KRAS mutations is not amenable to treatment and the G12C-directed agents Sotorasib and Adragrasib show a response rate of only approximately 40%, lasting for a mean period of 8 months. One approach to increase the efficacy of inhibitors is their inclusion into proteolysis-targeting chimeras (PROTACs), which… More > Graphic Abstract

Javaid Ali¹, Armando Ciancio², Kashif Ali Khan³, Nauman Raza^4,5, Haci Mehmet Baskonus^6,*, Muhammad Luqman¹, Zafar-Ullah Khan⁷

CMES-Computer Modeling in Engineering & Sciences, Vol.140, No.3, pp. 2275-2296, 2024, DOI:10.32604/cmes.2024.046923 - 08 July 2024

Abstract This study proposes a structure-preserving evolutionary framework to find a semi-analytical approximate solution for a nonlinear cervical cancer epidemic (CCE) model. The underlying CCE model lacks a closed-form exact solution. Numerical solutions obtained through traditional finite difference schemes do not ensure the preservation of the model’s necessary properties, such as positivity, boundedness, and feasibility. Therefore, the development of structure-preserving semi-analytical approaches is always necessary. This research introduces an intelligently supervised computational paradigm to solve the underlying CCE model’s physical properties by formulating an equivalent unconstrained optimization problem. Singularity-free safe Padé rational functions approximate the mathematical More >

XUHUI ZHAO^1,2, XIAOMIN HUANG¹, CHUNYAN DANG², XIA WANG¹, YUJIAO QI³, HONGLING LI^2,*

Oncology Research, Vol.32, No.5, pp. 999-1009, 2024, DOI:10.32604/or.2024.046679 - 23 April 2024

Abstract Background: EBV-miR-BARTs exhibit significant relevance in epithelial tumors, particularly in EBV-associated gastric and nasopharyngeal cancers. However, their specific mechanisms in the initiation and progression of gastric cancer remain insufficiently explored. Material and Methods: Initially, EBV-miRNA-BART6-5p and its target gene SMAD4 expression were assessed in EBV-associated gastric cancer tissues and cell lines. Subsequent transfection induced overexpression of EBV-miRNA-BART6-5p in AGS and MKN-45, and downregulation in EBV-positive cells (SUN-719). The subsequent evaluation aimed to observe their impact on gastric cancer cell proliferation, migration, and glycolytic processes, with the TGF-β/SMAD4 signaling pathway value clarified using a TGF-β inhibitor. Results:… More >

DANPING ZHU^1,#, GUANGMING LIU^1,#, KUAN FENG¹, SUYUN LI¹, DANDAN HU², SIDA YANG^3,*, PEIQING LI^1,*

BIOCELL, Vol.48, No.4, pp. 653-664, 2024, DOI:10.32604/biocell.2024.044856 - 09 April 2024

Abstract Background: During Enterovirus type 71 (EV71) infection, the structural viral protein 1 (VP1) activates endoplasmic reticulum (ER) stress associated with peripheral myelin protein 22 (PMP22) accumulation and induces autophagy. However, the specific mechanism behind this process remains elusive. Methods: In this research, we used the VP1-overexpressing mouse Schwann cells (SCs) models co-transfected with a PMP22 silencing or Autocrine motility factor receptor (AMFR/gp78) overexpressing vector to explore the regulation of gp78 on PMP22 and its relationship with autophagy and apoptosis. Results: The activity of gp78 could be influenced by EV71-VP1, leading to a decrease in the ubiquitination… More >

Yiwen Li^1,#, Hongyan Si^1,#, Peng Wang¹, Hai Luo¹, Minggui Shen², Xiaoping Rao³, Zhanqian Song², Shibin Shang², Zongde Wang^1,*, Shengliang Liao^1,*

Journal of Renewable Materials, Vol.12, No.1, pp. 45-56, 2024, DOI:10.32604/jrm.2023.031089 - 23 January 2024

Abstract Turpentine is a renewable and resourceful forest product. The deep processing and utilization of turpentine, particularly its primary component β-pinene, has garnered widespread attention. This study aimed to synthesize 40 derivatives of β-pinene, including nopinone, 3-cyanopyridines of nopinone, myrtanyl acid, myrtanyl acylthioureas, and myrtanyl amides. We assessed the antiviral activities of these β-pinene derivatives against influenza virus A/Puerto Rico/8/34 (H1N1) using the 3-(4,5-dimetylthiazol-2-yl)-2,5-diphenyltetrazolium bromide method. The β-pinene derivatives were used before and after cellular infection with the influenza virus to evaluate their preventive and therapeutic effects against the H1N1 virus. The results showed that only compound 10o More > Graphic Abstract

YINGDONG ZHANG^1,2, MING CHU^1,2,*, HONGZHOU LU^3,*

BIOCELL, Vol.47, No.12, pp. 2591-2595, 2023, DOI:10.32604/biocell.2023.030331 - 27 December 2023

Abstract Human immunodeficiency virus (HIV) infection of the central nervous system (CNS) has attracted significant attention because it contributes to severe complications of acquired immunodeficiency syndrome (AIDS) and seriously impairs the life quality of infected patients. In this review, we briefly describe the latent infection of HIV in CNS and focus on the role of the important immune cells, such as T cells, in the formation and maintenance of the HIV reservoir in CNS. This review explores the mechanisms by which T cells enter CNS and establish latent infection of HIV in the CNS. In conclusion, More > Graphic Abstract

Saeed M. Alshahrani¹, Jameel Almalki², Waleed Alshehri², Rashid Mehmood³, Marwan Albahar², Najlaa Jannah², Nayyar Ahmed Khan^1,*

Computer Systems Science and Engineering, Vol.47, No.2, pp. 1793-1817, 2023, DOI:10.32604/csse.2023.039648 - 28 July 2023

Abstract Artificial Intelligence (AI) has gained popularity for the containment of COVID-19 pandemic applications. Several AI techniques provide efficient mechanisms for handling pandemic situations. AI methods, protocols, data sets, and various validation mechanisms empower the users towards proper decision-making and procedures to handle the situation. Despite so many tools, there still exist conditions in which AI must go a long way. To increase the adaptability and potential of these techniques, a combination of AI and Bigdata is currently gaining popularity. This paper surveys and analyzes the methods within the various computational paradigms used by different researchers More >