Songnan Yang¹, Miao Zhang¹, Rongrong Yao¹, Liangyu Chen¹, Weixuan Cong¹, Dan Yao², Jian Zhang^1,3, Jun Zhang^1,*, Xueying Li^1,*

Phyton-International Journal of Experimental Botany, Vol.93, No.9, pp. 2209-2225, 2024, DOI:10.32604/phyton.2024.055046 - 30 September 2024

Abstract The high isoflavones content of soybeans is an important breeding goal due to the demonstrated benefits of isoflavones to human health and their association with plant resistance. In this study, quantitative trait loci (QTL) mapping for soybean isoflavone aglycones, including daidzin, glycerin, and genistin, and total isoflavones content was performed in a population of 178 F_2:6 recombinant inbred lines (RILs) which was generated from a cross between varieties Jinong 17 and Jinong 18. A genetic linkage map covering 1248 cM was constructed using the simple sequence repeat (SSR) molecular markers. The results revealed 22 isoflavone-related QTLs,… More >

Pengcheng Li^1,2,#, Tianze Zhu^1,#, Yunyun Wang^1,2, Shuangyi Yin¹, Xinjie Zhu¹, Minggang Ji¹, Wenye Rui¹, Houmiao Wang¹, Zefeng Yang^1,2,*, Chenwu Xu^1,2,*

Phyton-International Journal of Experimental Botany, Vol.93, No.7, pp. 1441-1453, 2024, DOI:10.32604/phyton.2024.052219 - 30 July 2024

Abstract The nutritional composition and overall quality of maize kernels are largely determined by the key chemical components: protein, oil, and starch. Nevertheless, the genetic basis underlying these nutritional quality traits during grain filling remains poorly understood. In this study, the concentrations of protein, oil, and starch were studied in 204 recombinant inbred lines resulting from a cross between DH1M and T877 at four different stages post-pollination. All the traits exhibited considerable phenotypic variation. During the grain-filling stage, the levels of protein and starch content generally increased, whereas oil content decreased, with significant changes observed between… More >

Xiao Han, Songnan Yang, Xueying Li, Qiulin Wu, Yongyi Xing, Jun Zhang^*, Fenglou Ling^*

Phyton-International Journal of Experimental Botany, Vol.92, No.9, pp. 2577-2589, 2023, DOI:10.32604/phyton.2023.029440 - 28 July 2023

Abstract Peanut, with high oil content, has been a major oil and food crop globally. The compositions of the fatty acids are the common factors in determining the oil quality. In the present study, an F2 segregated population with 140 individuals derived from the cross of Weihua8 (a cultivar) and 12L49 (a line with high oleic acid concentration) was used to construct a genetic map and conduct QTL mapping analysis. A total of 103 polymorphic SSR primers were utilized for genotyping the RILs and finally generating the SSR loci. Within the 103 SSR loci, a genetic… More >

Muhammad Sabar^1,2,#, Shahzad Amir Naveed^1,3,4,#,*, Shahid Masood Shah⁵, Abdul Rehman Khan⁵, Muhammad Musaddiq Shah⁶, Tahir Awan¹, Muhammad Ramzan Khan³, Zaheer Abbas³, Muhammad Arif^1,7,*

Phyton-International Journal of Experimental Botany, Vol.92, No.5, pp. 1421-1438, 2023, DOI:10.32604/phyton.2023.025801 - 09 March 2023

Abstract Drought is one of the major abiotic threat to rice production in the context of climate change. Super Basmati is an elite, fine grain basmati rice variety grown in Punjab, Pakistan. Due to drought sensitive in nature, its yield has been facing an alarming situation in production because of gradual decrease in irrigated water for a couple of years. Three reported novel QTLs for drought tolerance were selected for incorporation into Super Basmati by employing marker assisted selection strategy. IR55419-04 with novel QTLs was used as a donor parent. Foreground selection was performed by applying… More >

Rohini Bhat^1,*, Anil Kumar Singh², Muntazir Mushtaq³, Romesh Kumar Salgotra², Manmohan Sharma², Basharat Ahmad Bhat⁴, Umer Basu⁵, Ibrahim Al-Ashkar ⁶, Mohammad Anwar Hossain^7,*, Akihiro Ueda⁸, Ayman El Sabagh⁹

Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2439-2459, 2022, DOI:10.32604/phyton.2022.020100 - 12 July 2022

Abstract Identification of quantitative trait loci (QTLs) controlling yield and yield-related traits in rice was performed in the F₂ mapping population derived from parental rice genotypes DHMAS and K343. A total of 30 QTLs governing nine different traits were identified using the composite interval mapping (CIM) method. Four QTLs were mapped for number of tillers per plant on chromosomes 1 (2 QTLs), 2 and 3; three QTLs for panicle number per plant on chromosomes 1 (2 QTLs) and 3; four QTLs for plant height on chromosomes 2, 4, 5 and 6; one QTL for spikelet density on… More >

Hameed Gul¹, Mengya Qian¹, Mohammad G. Arabzai^1,2, Tianhui Huang¹, Qiannan Ma¹, Fangyu Xing¹, Wan Cao¹, Tingting Liu¹, Hong Duan¹, Qianlin Xiao^1,*, Zhizhai Liu^1,*

Phyton-International Journal of Experimental Botany, Vol.91, No.7, pp. 1429-1443, 2022, DOI:10.32604/phyton.2022.019842 - 14 March 2022

Abstract Kernel size-related traits, including kernel length, kernel width, and kernel thickness, are critical components in determining yield and kernel quality in maize (Zea mays L.). Dissecting the phenotypic characteristics of these traits, and discovering the candidate chromosomal regions for these traits, are of potential importance for maize yield and quality improvement. In this study, a total of 139 F2:3 family lines derived from EHel and B73, a distinct line with extremely low ear height (EHel), was used for phenotyping and QTL mapping of three kernel size-related traits, including 10-kernel length (KL), 10-kernel width (KWid), and 10-kernel… More >

Jianyu Lu¹, Qingping Jiang¹, Tongyu Liu¹, Yangyang Zhou¹, Mengtong Liu¹, Jing Qu², Yiyong Ma^2,*, Shuyan Guan^2,*

Phyton-International Journal of Experimental Botany, Vol.91, No.6, pp. 1199-1209, 2022, DOI:10.32604/phyton.2022.019298 - 14 February 2022

Abstract Maize flowering is an important agronomic character, which is controlled by quantitative trait loci (QTL). Over the years, a large number of flowering-related QTL have been found in maize and exist in public databases. However, combining these data, re-analyzing and mining candidate loci and fine mapping of flowering-related traits to reduce confidence intervals has become a hot issue in maize. In this study, the QTL of 6 important agronomic traits of maize flowering were collected from 15 published articles, including flowering period (DA), Days to tasseling (DTT), Days to silking (DS), Days to pollen shedding More >

Lin Zhang^1,2,*, Yiting Zou¹, Zhong Bian¹, Dong Xie¹, Hadi Yeilaghi¹, Xiaolei Fan^1,2, Dongsheng Zhao^1,2, Qiaoquan Liu^1,2,*

Phyton-International Journal of Experimental Botany, Vol.90, No.3, pp. 789-802, 2021, DOI:10.32604/phyton.2021.014880 - 30 March 2021

Abstract Rice panicle is the sink organ where assimilation product accumulates, and its morphology determines the rice yield. Panicle length has been suggested as a yield-related trait, but the genetic factor for its control is still limited. In this study, we carried out fine-mapping of qPL8, a QTL identified for panicle length in our previous work. Near isogenic line (NIL) with qPL8 exhibited elongated panicle without obvious effect on other panicle elements. With five key recombinants from NIL population, the locus was finally narrowed down to a 278-kb region, where 44 genes are annotated. By comparing the More >

Murad Awad¹, Photini V. Mylona², Alexios N. Polidoros^1,*

Phyton-International Journal of Experimental Botany, Vol.89, No.4, pp. 905-923, 2020, DOI:10.32604/phyton.2020.011235 - 09 November 2020

Abstract Discrimination among grapevine varieties based on quantitative traits, such as flowering, veraison and ripening dates is crucial for variety selection in the context of climate change and in breeding programs. These traits are under complex genetic control for which 6 linked SSR loci (VVS2, VVIn16, VMC7G3, VrZAG29, VMC5G7, and VVIB23) have been identified. Using these markers in HRM-PCR analysis, we assessed genetic diversity among a large collection of 192 grapevine varieties. The grapevine germplasm used encompasses the majority of Greek vineyard with 181 varieties, 3 prominent foreign varieties and 11 varieties of Palestinian origin. The… More >

Gutiérrez-Díez A¹, GE Salinas-García¹, L Iracheta-Donjuan², JA Torres-Castillo¹, N Mayek-Pérez³

Phyton-International Journal of Experimental Botany, Vol.82, pp. 203-208, 2013, DOI:10.32604/phyton.2013.82.203

Abstract Gene and quantitative trait loci (QTLs) localization in a model species allow to know their organization in the genome, and the possibility for the isolation and cloning of genes with agronomic importance. Seventy-three recombinant inbred lines (RILs) derived from the cross of Arabidopsis thaliana (L.) Heynh. ecotypes Columbia (Col) x Landsberg erecta (Ler) were grown in a greenhouse under contrasting soil moisture conditions (irrigated and water deficits). During their growth, some phenological (days to flowering) and plant growth traits (plant height, and number of nodes and leaves per plant) were measured. Significant differences for plant height More >