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  • Open Access

    ARTICLE

    Integrative Analysis of scRNA-Seq and Bulk RNA-Seq Reveals Novel Transcription Factor Regulating Endothelial Heterogeneity Induced by Lrg1 Following Cerebral Ischemia-Reperfusion

    SHAOFENG XIONG1,2, WENKAI LV3, GUOSHENG CAO4, LONGSHENG FU1, WEN LIU3, MENGFAN LEI2, YANNI LV1,5,*

    BIOCELL, Vol.50, No.1, 2026, DOI:10.32604/biocell.2025.073401 - 23 January 2026

    Abstract Objective: Leucine-rich alpha-2 glycoprotein 1 (Lrg1) could regulate diverse cells in cerebral ischemia-reperfusion. Our study seeks to uncover Lrg1’s impact on endothelial cell heterogeneity via differentiation pathways and transcription factors. Method: The CSOmap model measured cell-to-brain-center distances using single-cell RNA sequencing (scRNA-seq) data in middle cerebral artery occlusion reperfusion (MCAO/R). Monocle2 mapped endothelial differentiation paths. Gene set enrichment analysis (GSEA) analyzed endothelial subcluster variations. Database searches revealed a zinc finger MIZ-type containing 1 protein-frizzled 3 (Zmiz1-Fzd3) promoter interaction. Endothelial cells were transfected with a Fzd3 promoter-luciferase plasmid. Polymerase chain reaction (PCR) and western blotting assessed… More >

  • Open Access

    ARTICLE

    Enhanced COVID-19 and Viral Pneumonia Classification Using Customized EfficientNet-B0: A Comparative Analysis with VGG16 and ResNet50

    Williams Kyei*, Chunyong Yin, Kelvin Amos Nicodemas, Khagendra Darlami

    Journal on Artificial Intelligence, Vol.8, pp. 19-38, 2026, DOI:10.32604/jai.2026.074988 - 20 January 2026

    Abstract The COVID-19 pandemic has underscored the need for rapid and accurate diagnostic tools to differentiate respiratory infections from normal cases using chest X-rays (CXRs). Manual interpretation of CXRs is time-consuming and prone to errors, particularly in distinguishing COVID-19 from viral pneumonia. This research addresses these challenges by proposing a customized EfficientNet-B0 model for ternary classification (COVID-19, Viral Pneumonia, Normal) on the COVID-19 Radiography Database. Employing transfer learning with architectural modifications, including a tailored classification head and regularization techniques, the model achieves superior performance. Evaluated via accuracy, F1-score (macro-averaged), AUROC (macro-averaged), precision (macro-averaged), recall (macro-averaged), inference… More >

  • Open Access

    ARTICLE

    Dynamic Adaptive Weighting of Effectiveness Assessment Indicators: Integrating G1, CRITIC and PIVW

    Longyue Li1, Guoqing Zhang1, Bo Cao1, Shuqi Wang2, Ye Tian1,*

    CMC-Computers, Materials & Continua, Vol.86, No.2, pp. 1-26, 2026, DOI:10.32604/cmc.2025.070622 - 09 December 2025

    Abstract Modern battlefields exhibit high dynamism, where traditional static weighting methods in combat effectiveness assessment fail to capture real-time changes in indicator values, leading to limited assessment accuracy—especially critical in scenarios like sudden electronic warfare or degraded command, where static weights cannot reflect the operational value decay or surge of key indicators. To address this issue, this study proposes a dynamic adaptive weighting method for evaluation indicators based on G1-CRITIC-PIVW. First, the G1 (Sequential Relationship Analysis Method) subjective weighting method—translates expert knowledge into indicator importance rankings—leverages expert knowledge to quantify the relative importance of indicators via… More >

  • Open Access

    ARTICLE

    An Explainable Deep Learning Framework for Kidney Cancer Classification Using VGG16 and Layer-Wise Relevance Propagation on CT Images

    Asma Batool1, Fahad Ahmed1, Naila Sammar Naz1, Ayman Altameem2, Ateeq Ur Rehman3,4, Khan Muhammad Adnan5,*, Ahmad Almogren6,*

    CMES-Computer Modeling in Engineering & Sciences, Vol.145, No.3, pp. 4129-4152, 2025, DOI:10.32604/cmes.2025.073149 - 23 December 2025

    Abstract Early and accurate cancer diagnosis through medical imaging is crucial for guiding treatment and enhancing patient survival. However, many state-of-the-art deep learning (DL) methods remain opaque and lack clinical interpretability. This paper presents an explainable artificial intelligence (XAI) framework that combines a fine-tuned Visual Geometry Group 16-layer network (VGG16) convolutional neural network with layer-wise relevance propagation (LRP) to deliver high-performance classification and transparent decision support. This approach is evaluated on the publicly available Kaggle kidney cancer imaging dataset, which comprises labeled cancerous and non-cancerous kidney scans. The proposed model achieved 98.75% overall accuracy, with precision, More >

  • Open Access

    ARTICLE

    A Hybrid Model of Transfer Learning and Convolutional Neural Networks for Accurate Coffee Leaf Miner (CLM) Classification

    Nameer Baht1,*, Enrique Domínguez1,2,*

    CMC-Computers, Materials & Continua, Vol.85, No.3, pp. 4441-4455, 2025, DOI:10.32604/cmc.2025.069528 - 23 October 2025

    Abstract Coffee is an important agricultural commodity, and its production is threatened by various diseases. It is also a source of concern for coffee-exporting countries, which is causing them to rethink their strategies for the future. Maintaining crop production requires early diagnosis. Notably, Coffee Leaf Miner (CLM) Machine learning (ML) offers promising tools for automated disease detection. Early detection of CLM is crucial for minimising yield losses. However, this study explores the effectiveness of using Convolutional Neural Networks (CNNs) with transfer learning algorithms ResNet50, DenseNet121, MobileNet, Inception, and hybrid VGG19 for classifying coffee leaf images as… More >

  • Open Access

    ARTICLE

    ScRNA-seq and Experimental Analyses Unveil Lrg1 Regulating the Oxidative Phosphorylation Pathway to Affect Neutrophil Accumulation after Cerebral Ischemia-Reperfusion

    Luyao Jiang1,#, Longsheng Fu2,#, Shaofeng Xiong2,3, Guosheng Cao4, Yanqin Mei2,3, Yaoqi Wu2, Jin Chen1,*, Yanni LV2,5,6,*

    BIOCELL, Vol.49, No.9, pp. 1749-1769, 2025, DOI:10.32604/biocell.2025.068507 - 25 September 2025

    Abstract Background: After ischemic stroke, neutrophils hyperactivate, increasing in number and worsening inflammation, causing neural damage. Prior scRNA-seq showed Lrg1 modulates cells subsentence to cerebral ischemia-reperfusion injury, but its mechanism in regulating neutrophil accumulation/differentiation post-injury is unclear. Methods: Lrg1 knockout impact on neutrophil accumulation was assessed via immunofluorescence and western blot. Three-dimensional reconstruction of immunofluorescent staining analyzed cell-cell interactions among neutrophils and microglia. scRNA-seq of WT and Lrg1-/- mice from GSE245386 and GSE279462 was conducted. Each group conducted oxidative phosphorylation scoring via Gene Set Enrichment Analysis (GSEA), while Metascape was employed to perform GO and KEGG enrichment… More > Graphic Abstract

    ScRNA-seq and Experimental Analyses Unveil Lrg1 Regulating the Oxidative Phosphorylation Pathway to Affect Neutrophil Accumulation after Cerebral Ischemia-Reperfusion

  • Open Access

    ARTICLE

    Intelligent Concrete Defect Identification Using an Attention-Enhanced VGG16-U-Net

    Caiping Huang*, Hui Li, Zihang Yu

    Structural Durability & Health Monitoring, Vol.19, No.5, pp. 1287-1304, 2025, DOI:10.32604/sdhm.2025.065930 - 05 September 2025

    Abstract Semantic segmentation of concrete bridge defect images frequently encounters challenges due to insufficient precision and the limited computational capabilities of mobile devices, thereby considerably affecting the reliability of bridge defect monitoring and health assessment. To tackle these issues, a concrete defects dataset (including spalling, crack, and exposed steel rebar) was curated and multiple semantic segmentation models were developed. In these models, a deep convolutional network or a lightweight convolutional network were employed as the backbone feature extraction networks, with different loss functions configured and various attention mechanism modules introduced for conducting multi-angle comparative research. The… More >

  • Open Access

    ARTICLE

    Optimizing CNN Architectures for Face Liveness Detection: Performance, Efficiency, and Generalization across Datasets

    Smita Khairnar1,2, Shilpa Gite1,3,*, Biswajeet Pradhan4,*, Sudeep D. Thepade2,5, Abdullah Alamri6

    CMES-Computer Modeling in Engineering & Sciences, Vol.143, No.3, pp. 3677-3707, 2025, DOI:10.32604/cmes.2025.058855 - 30 June 2025

    Abstract Face liveness detection is essential for securing biometric authentication systems against spoofing attacks, including printed photos, replay videos, and 3D masks. This study systematically evaluates pre-trained CNN models— DenseNet201, VGG16, InceptionV3, ResNet50, VGG19, MobileNetV2, Xception, and InceptionResNetV2—leveraging transfer learning and fine-tuning to enhance liveness detection performance. The models were trained and tested on NUAA and Replay-Attack datasets, with cross-dataset generalization validated on SiW-MV2 to assess real-world adaptability. Performance was evaluated using accuracy, precision, recall, FAR, FRR, HTER, and specialized spoof detection metrics (APCER, NPCER, ACER). Fine-tuning significantly improved detection accuracy, with DenseNet201 achieving the highest… More > Graphic Abstract

    Optimizing CNN Architectures for Face Liveness Detection: Performance, Efficiency, and Generalization across Datasets

  • Open Access

    ARTICLE

    A Novel Dynamic Residual Self-Attention Transfer Adaptive Learning Fusion Approach for Brain Tumor Diagnosis

    Tawfeeq Shawly1, Ahmed A. Alsheikhy2,*

    CMC-Computers, Materials & Continua, Vol.82, No.3, pp. 4161-4179, 2025, DOI:10.32604/cmc.2025.061497 - 06 March 2025

    Abstract A healthy brain is vital to every person since the brain controls every movement and emotion. Sometimes, some brain cells grow unexpectedly to be uncontrollable and cancerous. These cancerous cells are called brain tumors. For diagnosed patients, their lives depend mainly on the early diagnosis of these tumors to provide suitable treatment plans. Nowadays, Physicians and radiologists rely on Magnetic Resonance Imaging (MRI) pictures for their clinical evaluations of brain tumors. These evaluations are time-consuming, expensive, and require expertise with high skills to provide an accurate diagnosis. Scholars and industrials have recently partnered to implement… More >

  • Open Access

    ARTICLE

    Deep Convolution Neural Networks for Image-Based Android Malware Classification

    Amel Ksibi1,*, Mohammed Zakariah2, Latifah Almuqren1, Ala Saleh Alluhaidan1

    CMC-Computers, Materials & Continua, Vol.82, No.3, pp. 4093-4116, 2025, DOI:10.32604/cmc.2025.059615 - 06 March 2025

    Abstract The analysis of Android malware shows that this threat is constantly increasing and is a real threat to mobile devices since traditional approaches, such as signature-based detection, are no longer effective due to the continuously advancing level of sophistication. To resolve this problem, efficient and flexible malware detection tools are needed. This work examines the possibility of employing deep CNNs to detect Android malware by transforming network traffic into image data representations. Moreover, the dataset used in this study is the CIC-AndMal2017, which contains 20,000 instances of network traffic across five distinct malware categories: a.… More >

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