Huiyan Liang¹, Wei Fang¹, Xiqiao Feng^1,*

The International Conference on Computational & Experimental Engineering and Sciences, Vol.29, No.2, pp. 1-1, 2024, DOI:10.32604/icces.2024.012719

Abstract Cell–extracellular matrix (ECM) interactions play a pivotal role in many functions of cells, for example, sensing, signaling, migration, and gene expression. The spatial-temporal dynamic evolution of cell–substrate adhesions involves complicated mechano-bio-chemical coupling mechanisms of integrin, adaptor and signaling proteins, and the interplay between the cytoskeleton and ECM as well. In this paper, we establish a multiscale dynamic model of cell–substrate interfaces considering intermolecular force transmission pathways, i.e., intra- and extra-cellular bond dynamics, and mechanochemical coupling regulations. To illustrate its applications, this model is used to reproduce several adhesion-related experimental phenomena of cells, including substrate rigidity… More >

Md. Mosiur Rahman^1,2, Md. Ruhul Quddus³, Quanle Xu⁴, Muhammad Malek Hossain², Rong Liu¹, Mengwei Li¹, Xin Yan¹, Guan Li¹, Yishan Ji¹, Chenyu Wang¹, Ashutosh Sarker⁵, Tao Yang¹, Xuxiao Zong¹, Md. Monoar Hossain⁶, Saleh Alfarraj⁷, Mohammad Javed Ansari⁸, Sagar Maitra^9,*, Akbar Hossain^10,*

Phyton-International Journal of Experimental Botany, Vol.93, No.8, pp. 1781-1804, 2024, DOI:10.32604/phyton.2024.048992 - 30 August 2024

Abstract Grass pea (Lathyrus sativus L.) is an imperative food crop cultured in dryland agricultural ecology. It is a vital source of dietary protein to millions of populaces living in low-income countries in South-East Asia and Africa. This study highlights the improvement of genomic properties and their application in marker-trait relationships for 17 yield-related characters in 400 grass pea genotypes from China and Bangladesh. These characters were assessed via 56 polymorphic markers using general linear model (GLM) (P+G+Q) and mixed linear model (MLM) (P+G+Q+K) in the tassel software based on the linkage disequilibrium and population structure analysis.… More >

Yi Xi, Li Zhang, Yanhong Xu, Wei Cheng, Chao Chen^*

Phyton-International Journal of Experimental Botany, Vol.93, No.7, pp. 1749-1765, 2024, DOI:10.32604/phyton.2024.051793 - 30 July 2024

Abstract In artificially controlled pot experiments, perennial ryegrass was mixed with other leguminous plants (white clover and alfalfa) and treated with lead, zinc and cadmium (337 mg·kg, 648 mg·kg, and 9 mg·kg, respectively) to simulate compound pollution conditions. The results showed that the concentrations of heavy metals, transport factors, and bioconcentration factors in mixed planting of ryegrass decreased compared with those in monoculture. Regardless of whether heavy metal pollution was introduced, mixed planting increased the aboveground and underground biomasses of ryegrass. The different mixed planting treatments had no significant impact on the chlorophyll concentration of ryegrass.… More >

CHENG-GONG LUO^1,2,#, JIAO ZHANG^1,#, YUN-ZHAO AN¹, XUAN LIU¹, SHUAI-JIE LI¹, WEI ZHANG¹, KAI LI¹, XU ZHAO¹, DONG-BO YUAN¹, LING-YUE AN¹, WEI CHEN², YE TIAN^1,*, BIN XU^1,*

BIOCELL, Vol.48, No.5, pp. 771-792, 2024, DOI:10.32604/biocell.2024.048878 - 06 May 2024

Abstract Background: Ferroptosis, a lipid peroxidation-mediated programmed cell death, is closely linked to tumor development, including prostate cancer (PCa). Despite established connections between ferroptosis and PCa, a comprehensive investigation is essential for understanding its impact on patient prognosis. Methods: A risk model incorporating four ferroptosis-related genes was developed and validated. Elevated risk scores correlated with an increased likelihood of biochemical recurrence (BCR), diminished immune infiltration, and adverse clinicopathological characteristics. To corroborate these results, we performed validation analyses utilizing datasets from both the Cancer Genome Atlas Cohort (TCGA) and the Gene Expression Synthesis Cohort (GEO). Moreover, we conducted… More >

Aysegul Akpinar^*

Phyton-International Journal of Experimental Botany, Vol.92, No.7, pp. 2197-2210, 2023, DOI:10.32604/phyton.2023.029006 - 29 May 2023

Abstract Carex species are widely used in many parts of the world and contain a large number of ecologically diverse species. Among the Carex species, some of them are known to be glycophytes, while others are halophytes. Carex morrowii Boott (Cyperaceae) is resistant to trample through their root structure and has an essential ornamental value in the landscape with their leaves. However, no information was found about the level of salinity tolerance/ sensitivity of the Carex morrowii among these species. In the present study, changes in trace element contents (Na, K, Ca, Cu, Mn, Mg, Ni, Fe, P,… More >

Abdulmoseen Segun Giwa^1,*, Mingqiang Sheng², Ndungutse Jean Maurice³, Xinxin Liu¹, Zelong Wang¹, Fengmin Chang⁴, Bo Huang⁴, Kaijun Wang⁴

Journal of Renewable Materials, Vol.11, No.6, pp. 2593-2629, 2023, DOI:10.32604/jrm.2023.026314 - 27 April 2023

Abstract Globally, fossil fuel dependence has created several environmental challenges and climate change. Hence, creating other alternative renewable and ecologically friendly bio-energy sources is necessary. Lignocellulosic biomass has gained significant attention recently as a renewable material for biofuel production. The large amounts of plantain and banana plant parts wasted after harvesting, as well as the peels generated daily by the fruit market and industries, demonstrate the potential of bioenergy resources. This review briefly assesses plantain and banana plant biomass (PBB) generated in the developing, developed, and underdeveloped countries, the consumable parts, and feasible products yield. It… More > Graphic Abstract

Kakudji Kisimba¹, Anand Krishnan^2,*, Mbuso Faya¹, Kahumba Byanga³, Kabange Kasumbwe⁴, Kaliyapillai Vijayakumar⁵, Ram Prasad^6,*

Journal of Renewable Materials, Vol.11, No.6, pp. 2575-2591, 2023, DOI:10.32604/jrm.2023.026159 - 27 April 2023

Abstract Nanoparticles have distinct properties that make them potentially valuable in a variety of industries. As a result, emerging approaches for the manufacture of nanoparticles are gaining a lot of scientific interest. The biological pathway of nanoparticle synthesis has been suggested as an effective, affordable, and environmentally safe method. Synthesis of nanoparticles through physical and chemical processes uses unsafe materials, expensive equipment and adversely affects the environment. As a result, in order to support the increased utilization of nanoparticles across many sectors, nanotechnology research activities have shifted toward environmentally safe and cost-effective techniques that outperform chemical… More > Graphic Abstract

Riaz Ahmad^1,*, Hafiza Muniba Din Muhammad², Safina Naz², Meryam Manzoor², Muhammad Ahsan Altaf³

Phyton-International Journal of Experimental Botany, Vol.92, No.5, pp. 1539-1553, 2023, DOI:10.32604/phyton.2023.026672 - 09 March 2023

Abstract Salinity is one of the major constraints reducing plant growth and yield. Irrigation with poor quality and brackish water to orchards is a major cause of stunted growth and low yield. The salt tolerance mechanism is one of the complicated genomic characters that is very problematic to develop in fruit trees and becomes much more severe at any growth and developmental stage. Osmotic stress and hormonal imbalances are major constraints causing low biomass production. Fruit tree tolerance/sensitivity is chiefly based on the activation of a defense system comprised of super-oxidase dismutase (SOD), peroxidase (POD) and… More >

Sasa Jing¹, Yuan Tian¹, Heng Zhang², John T. Hancock³, Ying Zhu^2,*, Ping Li^1,*

Phyton-International Journal of Experimental Botany, Vol.92, No.4, pp. 1203-1214, 2023, DOI:10.32604/phyton.2023.026305 - 06 January 2023

Abstract The crop seeds have been a staple food for humans, and seed yield is important for sustaining agriculture development and enhancing human adaptability to food risks. The phenomenon of pre-harvest sprouting (PHS), caused by seed dormancy deficiency, and the phenomenon of low seedling emergence caused by seed deep dormancy, will lead to a reduction in agricultural production. Therefore, it is particularly important to understand the regulation mechanisms of seed dormancy. There are many studies on the regulation of seed dormancy in rice, but there are few studies on the regulation of seed dormancy in other More >

Hosny Abdel Aziz¹, Mohamed Sharaf^2,3, Magdy Omar⁴, Ahmed Abou El-Yazied⁵, Nada Ibrahim AlJwaizea⁶, Shaimaa Ismail⁵, Mohamed M. A. Omar⁷, Khadiga Alharbi^6,*, Amr Elkelish^8,9, Moataz Tawfik¹⁰

Phyton-International Journal of Experimental Botany, Vol.92, No.4, pp. 1019-1036, 2023, DOI:10.32604/phyton.2023.026769 - 06 January 2023

Abstract Drought stress has become more common in recent years as a result of climate change impacts on the production of banana crops and other fruit trees. The growth and productivity of Musa spp are severely impacted by the gradual degradation of water resources and the erratic distribution pattern of annual precipitation amount. The aim of the work includes increased drought tolerance in light of water scarcity in the world as a result of the bananas’ being gluttonous for water needs. This investigation was carried out from 2019 to 2020 to study the effect of potassium silicate… More >