Totan Kumar Ghosh¹, Md. Roushonuzzaman Rakib¹, Munna¹, S. M. Zubair AL-Meraj¹, Md. Moshiul Islam², Anika Nazran¹, Mohammad Golam Mostofa^3,*

Phyton-International Journal of Experimental Botany, Vol.94, No.12, pp. 3925-3943, 2025, DOI:10.32604/phyton.2025.073382 - 29 December 2025

Abstract The productivity of common bean (Phaseolus vulgaris L.), an economically important legume, is severely hindered by drought stress. While melatonin (Mel) and methyl jasmonate (MeJA) are known to alleviate abiotic stresses, their combined effects in mitigating drought-induced oxidative stress are unknown. Here, we examined the synergistic effects of Mel and MeJA in alleviating drought-associated oxidative damage in common bean. Compared with well-watered controls, drought stress caused a significant decline in plant biomass, photosynthetic pigments, and photosystem II efficiency (F_v/F_m). Drought also significantly increased hydrogen peroxide (H₂O₂) accumulation, which likely contributed to membrane lipid peroxidation, as indicated by… More >

Abdil Hakan Eren^*

Phyton-International Journal of Experimental Botany, Vol.94, No.10, pp. 3085-3107, 2025, DOI:10.32604/phyton.2025.069506 - 29 October 2025

Abstract The FAR1-related sequence (FAR1) gene family consists of transcription factors that originated from transposases and is crucial for light signaling and stress adaptation in plants. Despite the recognized importance of FAR1 genes in model organisms, their genomic architecture, structural variability, and expression patterns in Phaseolus vulgaris have yet to be investigated. This study offers the inaugural comprehensive genome-wide identification and characterization of the FAR1 gene family in P. vulgaris. A total of 27 PvulFAR1 genes were identified, and their chromosomal distribution, gene structures, conserved domains, and phylogenetic relationships were analyzed systematically. The promoter regions of these genes were discovered… More >

Gülay Zulkadir^*

Phyton-International Journal of Experimental Botany, Vol.94, No.7, pp. 2117-2129, 2025, DOI:10.32604/phyton.2025.066762 - 31 July 2025

Abstract Bean (Phaseolus vulgaris) is a globally important legume crop valued for its nutritional content and adaptability. Establishing a robust root system during early growth is critical for optimal nutrient uptake, shoot development, and increased resistance to biotic stress. This study evaluated the effects of exogenous indole-3-butyric acid (IBA) on root and shoot development in two bean cultivars, Onceler-98 and Topcu, during the seedling stage. IBA was applied at four concentrations: 0 (control), 50, 100, and 150 μM. Morphological parameters measured included root length (RL), root fresh weight (RFW), root dry weight (RDW), root nodule number (RNN), More >

Abdil Hakan Eren^*

Phyton-International Journal of Experimental Botany, Vol.93, No.11, pp. 2883-2907, 2024, DOI:10.32604/phyton.2024.058627 - 30 November 2024

Abstract Background: Aldehyde dehydrogenase (ALDH) genes constitute an important family of supergenes that play key roles in synthesizing various biomolecules and maintaining cellular homeostasis by catalyzing the oxidation of aldehyde products. With climate change increasing the exposure of plants to abiotic stresses such as salt and drought, ALDH genes have been identified as important contributors to stress tolerance. In particular, they help to reduce stress-induced lipid peroxidation. Objectives: This study aims to identify and characterize members of the ALDH supergene family in Phaseolus vulgaris through a genome-wide bioinformatic analysis and investigate their role in response to abiotic stressors such… More >

Esra Arslan Yuksel^*

Phyton-International Journal of Experimental Botany, Vol.93, No.9, pp. 2189-2207, 2024, DOI:10.32604/phyton.2024.055053 - 30 September 2024

Abstract Heavy metal contamination in the environment, resulting from human activities or natural processes, poses a significant and widespread challenge. L-glutamic (L-glu) and L-aspartic acid (L-asp) treatments have been reported to improve plant metabolism of heavy metal-exposed plants, but the role of these amino acids in the resistance to lead (Pb²⁺), cadmium (Cd²⁺), arsenic (As³⁺) and nickel (Ni²⁺) treated-bean are unclear when applied together. This study investigated the L-glu and L-asp supplementation-induced changes in some physio-biochemical parameters and some stress-related gene expression levels in Pb²⁺, Cd²⁺, As³⁺, and Ni²⁺-stressed Phaseolus vulgaris (Elkoca and Gina) grown in nutrient solution. The combination of… More >

Julio C. Anchondo-Páez, Esteban Sánchez^*, Carlos A. Ramírez-Estrada, Alondra Salcido-Martínez, Erick H. Ochoa-Chaparro

Phyton-International Journal of Experimental Botany, Vol.93, No.5, pp. 963-980, 2024, DOI:10.32604/phyton.2024.048742 - 28 May 2024

Abstract Beans contain a wide range of vitamins, proteins, calcium, and zinc which make them an important food source for many countries. To meet the demand for bean production worldwide, large amounts of fertilizers and pesticides are used. However, the cost of production and environmental impact increases. To produce food sustainably, the use of beneficial nutrients such as silicon as a biostimulant has been proposed. However, information about the effect of different sources of silicon on the metabolism of bean plants is scarce. Bean plants cv. Strike were grown in pots for 60 days and the… More >

Limin Yin^#, Chang Liu^#, Zicong Liang, Dajun Liu, Guojun Feng, Zhishan Yan^*, Xiaoxu Yang^*

Phyton-International Journal of Experimental Botany, Vol.92, No.11, pp. 2981-2998, 2023, DOI:10.32604/phyton.2023.043151 - 24 October 2023

Abstract The phenotype of a common bean plant is often closely related to its yield, and the yield of plants with reduced height or poor stem development during growth is low. Mutants serve as an essential gene resource for common bean breeding genetic research. Although model plants and crops are studied to comprehend the molecular mechanisms and genetic basis of plant phenotypes, the molecular mechanism of phenotypic variation in common beans remains underexplored. We here used the mutant ‘nts’ as material for transcriptome sequencing analysis. This mutant was obtained through ⁶⁰Co-γ irradiation from the common bean variety… More >

Abdelmajid Krouma^1,2,*

Phyton-International Journal of Experimental Botany, Vol.92, No.7, pp. 2133-2150, 2023, DOI:10.32604/phyton.2023.029048 - 29 May 2023

Abstract Iron is an essential element for plants as well as all living organisms, functioning in various physiological and biochemical processes such as photosynthesis, respiration, DNA synthesis, and N₂ fixation. In the soil, Fe bioavailability is extremely low, especially under aerobic conditions and at high pH ranges. In contrast, plants with nodules on their roots that fix atmospheric nitrogen need much more iron. To highlight the physiological traits underlying the tolerance of N₂-fixing common bean to iron deficiency, two genotypes were hydroponically cultivated in a greenhouse: Coco nain (CN) and Coco blanc (CB). Plants were inoculated with… More >

Aguilar-Benítez G^1*, CB Peña-Valdivia², R Castro-Rivera³, JP Lara-Ávila¹, E Cruz-Crespo⁴, AN Rojas-Velázquez¹

Phyton-International Journal of Experimental Botany, Vol.86, pp. 28-39, 2017, DOI:10.32604/phyton.2017.86.028

Abstract It is documented that vermicompost increases germination and productivity of crops, but little is known of its effect on plant physiological responses under soil water deficit. The aim of this study was to analyze the effect of vermicompost and irrigation interruption on stomatal conductance, gas exchange, and yield of common bean cultivars (drought tolerant -cv. 92 and drought susceptible-cv. 122). Plants were cultivated in unamended soil or soil amended with 1.5 and 3% of vermicompost, with irrigation during the whole cycle but irrigation interruption at the flowering stage. Changes in soil moisture, stomatal conductance (g_s), transpiration… More >

Hermosillo-Cereceres MA¹, E Sánchez¹, E Muñoz-Márquez¹, A Guevara-Aguilar¹, M García-Bañuelos¹, D Ojeda-Barrios²

Phyton-International Journal of Experimental Botany, Vol.83, pp. 347-352, 2014, DOI:10.32604/phyton.2014.83.347

Abstract Selenium (Se) is an essential element for many organisms, although in high concentrations it may become toxic, leading to the generation of reactive oxygen species (ROS). In this study, bean plants received different application rates of Se (0, 10, 20, 40, 80, and 160 µM) in the form of selenite and selenate to evaluate the activity of the detoxifying enzymes of H₂O₂. The results indicated that the activity of these enzymes in bean plants depended on the chemical form of Se: selenite at rates of 20 µM or greater diminished biomass and yield, increasing the activity More >