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  • Open Access

    ARTICLE

    Genetic Diversity and Population Structure Analysis of Barley Landraces from Shanghai Region Using Genotyping-by-Sequencing

    Luli Li1,2, Nigel G. Halford3, Huihui Wang4, Yingjie Zong1, Zhenzhu Guo1, Ruiju Lu1, Chenghong Liu1, Zhiwei Chen1,*

    Phyton-International Journal of Experimental Botany, Vol.92, No.4, pp. 1275-1287, 2023, DOI:10.32604/phyton.2023.026946 - 06 January 2023

    Abstract Barley (Hordeum vulgare L.) is an important economic crop for food, feed and industrial raw materials. In the present research, 112 barley landraces from the Shanghai region were genotyped using genotyping-by-sequencing (GBS), and the genetic diversity and population structure were analyzed. The results showed that 210,268 Single Nucleotide Polymorphisms (SNPs) were present in total, and the average poly-morphism information content (PIC) was 0.1642. Genetic diversity and population structure analyses suggested that these barley landraces were differentiated and could be divided into three sub-groups, with morphological traits of row-type and adherence of the hulls the main distinguishing More >

  • Open Access

    ARTICLE

    Genome-wide identification and in silico gene expression analysis of the related to ABI3/VP1 (RAV) transcription factor family in barley (Hordeum vulgare L.)

    CÜNEYT UÇARLI*

    BIOCELL, Vol.45, No.6, pp. 1673-1685, 2021, DOI:10.32604/biocell.2021.016316 - 01 September 2021

    Abstract RAV (Related to ABI3/VP1) transcription factors are unique members of the AP2-ERF superfamily with AP2 and B3 domains and play important roles in the regulation of seed germination, plant growth, and stress response. In the study, 7 RAV genes, named HvRAVs, were identified in barley based on the available genome sequences. While five of the seven HvRAVs were located on chromosome 3, HvRAV5 and HvRAV7 were located on chromosome 1 and 4, respectively. Six of the predicted HvRAVs were intron-less, except HvRAV2, which had one intron. HvRAV proteins have shown basic, instable, and hydrophilic properties. The AP2 domain specific… More >

  • Open Access

    ARTICLE

    Genome-Wide Identification of Candidate Genes Associated with β-glucan Traits in a Hulled and Hulless Barley (Hordeum vulgare L.) Population

    Longhua Zhou1,2,#, Ting He1,2,#, Guimei Guo1,2, Jing Li1,2, Ruiju Lu1,2, Yingbo Li1,2,*, Chenghong Liu1,2,*

    Phyton-International Journal of Experimental Botany, Vol.89, No.4, pp. 987-997, 2020, DOI:10.32604/phyton.2020.011728 - 09 November 2020

    Abstract Barley grain is a valuable source of β-glucan, which is an important component of dietary fiber with significant human health benefits. Although the genetic basis of β-glucan biosynthesis has been widely studied, a genome-wide association study (GWAS) is still required for a scan of the candidate genes related to the complex quantitative trait based on the high-quality barley reference genome. In this study, a GWAS was conducted using a population composed of 87 barley landraces (39 hulled and 48 hulless, β-glucan from 2.07% to 6.56%) with 191,098 nucleotide polymorphisms (SNPs) markers to cover the chromosomes with the… More >

  • Open Access

    ARTICLE

    Stress Ameliorative Effects of Indole Acetic Acid on Hordeum vulgare L. Seedlings Subjected to Zinc Toxicity

    Monika Sood1, Shanti S. Sharma1, Joginder Singh1, Ram Prasad2,3,*, Dhriti Kapoor1,*

    Phyton-International Journal of Experimental Botany, Vol.89, No.1, pp. 71-86, 2020, DOI:10.32604/phyton.2020.07180 - 01 March 2020

    Abstract The heavy metals present in the environment accumulate in the plants and affect their productivity and yield. By entering the food chain, metals cause several serious health problems in human beings as well as in other organisms. Indole acetic acid (IAA) is known to act as a signaling molecule between symbiotic association of metal accumulating plants and plant growth promoting rhizobacteria (PGPR). Present study demonstrated a protective role of IAA against surplus Zinc (Zn)-induced toxicity to Hordeum vulgare seedlings. Elevated Zn concentrations suppressed the plant growth, caused a reduction in leaf relative water contents (RWC) and More >

  • Open Access

    ARTICLE

    Effects of Rhizoglomus intraradices, Azospirillum brasilense and plant growth regulators application on root architecture in barley (Hordeum vulgare L.)

    Zepeda-Guzmán S1, M Gómez-Romero2, C Sosa-Aguirre1, J Villegas1

    Phyton-International Journal of Experimental Botany, Vol.87, pp. 183-190, 2018, DOI:10.32604/phyton.2018.87.183

    Abstract Changes in root architecture are a strategy used by plants to explore the soil for available resources. The presence of beneficial microorganisms in the rhizosphere as well as plant growth regulators can cause changes in root development and promote the availability of water and nutrients. The effect of microorganisms or growth regulators on plant growth has been tested, but little is known about the effect they have on the architecture of the root of Hordeum vulgare L. Therefore the objective of this study was to evaluate the effect of the application of Rhizoglomus intraradices, Azospirillum brasilense, quercetin… More >

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