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Genome-Wide Identification of ABCC Gene Subfamily Members and Functional Analysis of CsABCC11 in Camellia sinensis

by Mingyuan Luo1, Shiyu Tian1, Xinzhuan Yao2, Yue Wan4, Zhouzhuoer Chen1, Zifan Yang4, Huagen Hao4, Fei Liu3, Hu Tang1,2,*, Litang Lu1,2,*

1 The Key Laboratory of Plant Resources Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), College of Life Science, Guizhou University, Guiyang, 550025, China
2 College of Tea Science, Institute of Plant Health & Medicine, Guizhou University, Guiyang, 550025, China
3 Wengfu Group, Guiyang, 550025, China
4 Huaneng Clean Energy Research Institute, Guiyang, 550000, China

* Corresponding Authors: Hu Tang. Email: email; Litang Lu. Email: email

(This article belongs to the Special Issue: Plant Secondary Metabolism and Functional Biology)

Phyton-International Journal of Experimental Botany 2024, 93(8), 2019-2036. https://doi.org/10.32604/phyton.2024.052938

Abstract

The ATP-binding cassette (ABC) transporter is a gene superfamily in plants. ATP-binding cassette subfamily C (ABCC) protein is a multidrug resistance-associated (MRP) transporter. They play various roles in plant growth, development, and secondary metabolite transport. However, there are few studies on ABCC transporters in tea plants. In this study, genome-wide association study (GWAS) analysis of epigallocatechin gallate (EGCG) content in 108 strains of Kingbird revealed that CsABCCs may be involved in EGCG transport. We identified 25 CsABCC genes at the genomic level of the tea plant, their phylogenetic tree, gene structure, targeted miRNA and other bioinformatics were analyzed. The expression patterns of CsABCCs in eight different tissues and abiotic stress indicate that they have potential roles in regulating the growth, development, and defense of tea plants. The correlation analysis revealed that the expression of the CsABCC11 gene was closely related to the EGCG content in tea buds of 108 strains of the Kingbird, and the subcellular localization experiments in tobacco showed that CsABCC11 protein was localized on the plasma membrane. The virus-induced gene silencing (VIGS) strategy in tea plants further verified that CsABCC11 was involved in EGCG accumulation. Our study laid a foundation for studying the biological function of CsABCC and provided a new candidate molecular marker gene for further EGCG-related variety breeding, which will be of great interest to breeders.

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APA Style
Luo, M., Tian, S., Yao, X., Wan, Y., Chen, Z. et al. (2024). Genome-wide identification of abcc gene subfamily members and functional analysis of csabcc11 in camellia sinensis. Phyton-International Journal of Experimental Botany, 93(8), 2019-2036. https://doi.org/10.32604/phyton.2024.052938
Vancouver Style
Luo M, Tian S, Yao X, Wan Y, Chen Z, Yang Z, et al. Genome-wide identification of abcc gene subfamily members and functional analysis of csabcc11 in camellia sinensis. Phyton-Int J Exp Bot. 2024;93(8):2019-2036 https://doi.org/10.32604/phyton.2024.052938
IEEE Style
M. Luo et al., “Genome-Wide Identification of ABCC Gene Subfamily Members and Functional Analysis of CsABCC11 in Camellia sinensis,” Phyton-Int. J. Exp. Bot., vol. 93, no. 8, pp. 2019-2036, 2024. https://doi.org/10.32604/phyton.2024.052938



cc Copyright © 2024 The Author(s). Published by Tech Science Press.
This work is licensed under a Creative Commons Attribution 4.0 International License , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
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