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Xinyi Zhang, Zimeng Yu, Pingfang Yang^*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1665-1679, 2023, DOI:10.32604/phyton.2023.029482 - 11 April 2023
Abstract Sacred lotus (Nelumbo nucifera) is a typical aquatic plant, belonging to basal eudicot plant, which is ideal for genome and genetic evolutionary study. Understanding lotus gene diversity is important for the study of molecular genetics and breeding. In this research, public RNA-seq data and the annotated reference genome were used to identify the genes in lotus. A total of 26,819 consensus and 1,081 novel genes were identified. Meanwhile, a comprehensive analysis of gene alternative splicing events was conducted, and a total of 19,983 “internal” alternative splicing (AS) events and 14,070 “complete” AS events were detected in… More >

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Xianrong Fu, Aiping Song, Bo Peng, Song Li, Weixin Liu, Lingling Zhang, Jiafu Jiang, Sumei Chen, Fadi Chen^*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1681-1694, 2023, DOI:10.32604/phyton.2023.027870 - 11 April 2023
（This article belongs to the Special Issue: Advances in Molecular Genetics and Physiology towards a Better Understanding of Agricultural Crop Plants)
Abstract Brassinosteroids (BRs), a class of steroid phytohormones, play a critical role in plant growth and development. The DWF4 gene encodes a cytochrome P450 enzyme (CYP90B1), which is considered a rate-limiting enzyme in BR biosynthesis. Here, we identified a homologous gene of DWF4 in chrysanthemum, CmDWF4. This gene was predicted to encode 491 amino acid residues with a molecular weight of 56.2 kDa and an isoelectric point (pI) of 9.10. Overexpression of CmDWF4 in chrysanthemum was found to significantly increase growth rate, number, and length of lateral buds. Transcriptome analysis showed that multiple xyloglucan endotransglycosylase/hydrolase (XTH) family encoding More >

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ARTICLE

Ibrahim Hmmam^1,*, Ali Raza², Ivica Djalovic³, Nagwa Khedr¹, Abdou Abdellatif¹
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1695-1711, 2023, DOI:10.32604/phyton.2023.028317 - 09 March 2023
（This article belongs to the Special Issue: Physiological and Molecular Interventions in Improving Abiotic Stress Tolerance in Plants)
Abstract Banana is a tropical crop cultivated in warm places. Chilling stress in Egypt is making banana crops less productive. Abscisic acid (ABA), a key plant hormone, regulates metabolic and physiological processes and protects plants from a variety of stresses. In vitro growing banana shoots were pre-treated with ABA at four concentrations (0, 25, 50, and 100 mM) and chilled at 5°C for 24 h, followed by a six-day recovery period at 25°C. By comparing ABA treatments to both positive and negative controls, physiological and biochemical changes were investigated. Chilling stress (5°C) caused a considerable increase… More >

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ARTICLE

Shunde Su^1,2,#, Huan Chang^3,#, Xiangyang Kang^1,*, Renhua Zheng^2,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1713-1723, 2023, DOI:10.32604/phyton.2023.027586 - 11 April 2023
（This article belongs to the Special Issue: Phytohormones in Improving Crop Production and Stress Tolerance)
Abstract As the reproductive organ of the endangered species Fokienia hodginsii, the size of the cones is a constraint on the reproductive renewal of the population. In this study, the molecular basis of the influence of cone size on F. hodginsii was elucidated by comparing the phenotype, biochemistry, and transcriptome of two cultivars of F. hodginsii (‘FJ431’ and ‘FJ415’). The two cultivars differed significantly in cone size, with FJ431 having a significantly larger cone size and weight than FJ415, 1.32 and 1.90 times that of FJ415, respectively. RNA-Seq analysis of both cultivars retrieved 75,940 genes whose approximate functions… More >

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ARTICLE

Sheeba Naaz^1,2, Nadeem Ahmad², Asma A. Al-Huqail³, Mohammad Irfan⁴, Faheema Khan³, Mohammad Irfan Qureshi^1,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1725-1742, 2023, DOI:10.32604/phyton.2023.026100 - 11 April 2023
Abstract Cadmium (Cd) and Mercury (Hg) is among the heavy metals most hazardous for plant and human health. Known to induce oxidative stress in plants and disbalance equilibrium in the antioxidant defence system, these metals alter plant growth and cause damage at the cellular and molecular levels. Soybean is an important oilseed crop that is raised in soils often contaminated by Cd and Hg. The comparative studies on the deleterious effect of Cd and Hg and the defence system of antioxidants were not studied earlier in soybean plant. In this study, soybean plants were exposed to… More >

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ARTICLE

Hongxiu Gao¹, Lin Zhu², Tianqi Liu¹, Xueyu Leng¹, Zhenxing Zhu³, Wei Xie¹, Haitao Lv¹, Zhengxun Jin¹, Ping Wu^4,#, Zhongchen Zhang^1,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1743-1763, 2023, DOI:10.32604/phyton.2023.026516 - 11 April 2023
（This article belongs to the Special Issue: Identification of Genetic/Epigenetic Components Responding to Biotic and Abiotic Stresses in Crops)
Abstract Cyclophilin (CYP) plays an important role in plant response to stress, and OsCYP2, one gene of cyclophlilin family, is involved in auxin signal transduction and stress signaling in rice. However, the mechanism that OsCYP2 is involved in rice response to low temperature is still unclear. We identified a new OsCYP2 allelic mutant, lrl3, with fewer lateral roots, and the differences in shoot height, primary root length and adventitious root length increased with the growth process compared to the wild-type plant. Auxin signaling pathway was also affected and became insensitive to gravity. The transgenic rice plants with over-expression… More >

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ARTICLE

Xiaotian Liang^1,#, Qi Wen^1,#, Rui Luo¹, Yanxin Zhang¹, Mingda Yin¹, Yanpeng Wen¹, Xuemei Hu¹, Zhiyan Wang¹, Yumiao Huo¹, Fenglan Huang^{1,2,3,4,5,6,*}
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1765-1792, 2023, DOI:10.32604/phyton.2023.026935 - 11 April 2023
（This article belongs to the Special Issue: Integrating Agronomy and Plant Physiology for Improving Crop Production)
Abstract Castor bean (Ricinus communis L.), is one of the top 10 oilseed crops in the world and, therefore, of high economic value. Hybridization is one of the most effective ways to breed new varieties with high yield, high oil content, and better stress resistance. Therefore, prediction of desired traits in castor hybrid offspring is particularly important. In this study, proteomic analysis was performed to identify differentially expressed proteins (DEPs) in seeds between castor hybrid offspring and their female (Lm female line aLmAB₂) and male parents (CSR·181). Among the DEPs upregulated in the seeds of hybrid offspring, the… More >

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529

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ARTICLE

Yanyan Pu^1,#, Liwen Wang^2,#, Leilei Li³, Yujun Si⁴, Shubin Xie², Yunzhe Cong¹, Dong Wang¹, Yongchao Gong¹, Rumei Tian¹, Xue Chen³, Xiaoyan Zhang¹, Min Liu¹, Hanfeng Ding^1,3,*, Nana Li^1,3,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1793-1812, 2023, DOI:10.32604/phyton.2023.026822 - 11 April 2023
（This article belongs to the Special Issue: Integrating Agronomy and Plant Physiology for Improving Crop Production)
Abstract During the life cycle of a plant, seed germination is crucial. Upon ingestion of water, the dry seeds resumed energy metabolism and cellular repair. To dissect the complex mechanisms at the very beginning of seed germination, two approaches including transcriptome and small RNA sequencing were conducted during the water imbibition process of mung bean seeds compared with dry seed. The transcriptome sequencing analysis identified 10,108 differentially expressed genes (DEGs) between dry and imbibed mung bean seeds. KEGG enrichment analyses demonstrated numerous DEGs involved in hormone signaling pathways, carbohydrate, and energy metabolism. Out of the total… More >

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516

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ARTICLE

Bassam F. Alowaiesh^1,*, M. M. Gad², Mohamed Saleh M. Ali³
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1813-1829, 2023, DOI:10.32604/phyton.2023.026950 - 11 April 2023
Abstract Olive productivity should be improved through stimulating nutrition, particularly under poor fertility soils. Consequently, the objective of this study was to assess the efficacy of applying organic and bio-fertilizers on the physiological growth, yield and fruit quality of olive trees under newly reclaimed poor-fertility sandy soil in an arid environment. During a field experiment carried out at El-Qantara, North Sinai, Egypt over two consecutive seasons (2019–2020 and 2020–2021), olive Kalamata trees were evaluated under three organic fertilizer treatments alone or in combination with three bio-fertilizers treatments. Organic fertilizer was applied as goat manure (16.8 kg/tree/year),… More >

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602

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ARTICLE

Adalberto Benavides-Mendoza¹, Rebeca Betancourt-Galindo², Nazario Francisco-Francisco^3,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1831-1840, 2023, DOI:10.32604/phyton.2023.028085 - 11 April 2023
（This article belongs to the Special Issue: Molecular and Cellular Communication Between Plants and Plant Growth-Promoting Microorganisms and Their Nanoparticles for Abiotic and Biotic Stress Tolerance)
Abstract

Micronutrient nanoparticles (NPs) are currently an option for chemical fertilization and biostimulation in crops. However, there is little information on the phytotoxic or biostimulatory effects of NPs at low concentrations of some elements, such as Zn. In this study, the effect of low concentrations of Zn oxide (ZnO) NPs on germination, growth variables, and nutritional attributes of lettuce (Lactuca sativa L.) was evaluated in comparison to Zn sulfate. Romaine lettuce seeds were treated with ZnSO₄^-- × 7H₂O and ZnO NPs at Zn molar concentrations of 1 × 10⁻³, 5 × 10⁻³, 1 × 10⁻⁴, 5 × 10⁻⁴, 1

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ARTICLE

Minmin Xiao¹, Moxiang Cheng¹, Shuangquan Xie¹, Xiushuang Wang¹, Xingming Hao², Li Zhuang^1,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1841-1857, 2023, DOI:10.32604/phyton.2023.027369 - 11 April 2023
（This article belongs to the Special Issue: Plant–Environment Interactions)
Abstract To clarify the characteristics of photoinhibition and the primary defense mechanisms of ephemeral plant leaves against photodestruction under high temperature stress, inhibitors and the technology to determine chlorophyll fluorescence were used to explore the protective effects of D1 protein turnover and the lutein cycle in the high temperature stress of the leaves of three ephemeral plants. The results showed that the maximum light conversion efficiency (Fv/Fm) of the ephemeral plant leaves decreased, and the initial fluorescence (Fo) increased under 35°C ± 1°C heat stress for 1–4 h or on sunny days in the summer. Both… More >

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Yue Wang^1,#, Xiujie Li^2,#, Yusen Wu², Zhonghui Cai¹, Bo Li², Zhaosen Xie^1,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1859-1871, 2023, DOI:10.32604/phyton.2023.027067 - 11 April 2023
Abstract It is generally agreed that many Vitis vinifera L. cultivars are self-fertile, where self-pollination often occurs before capfall in a process called cleistogamy. Therefore, it is difficult to identify the right time to remove stamens before self-pollination during the cross-breeding of grape. For this paper, we observed the process of grape flowering and measured the pollen viability and stigma receptivity of grape flowers of ‘Shine Muscat’ in order to identify the starting time of self-pollination before capfall and to provide useful information for improving the efficiency of cross-breeding. The results demonstrate that the anther is not… More >

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REVIEW

Mohammad Reza Boorboori, Husen Qiu, Jieyun Liu, Haiyang Zhang^*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1873-1886, 2023, DOI:10.32604/phyton.2023.027924 - 11 April 2023
（This article belongs to the Special Issue: Identification of Genetic/Epigenetic Components Responding to Biotic and Abiotic Stresses in Crops)
Abstract Rice is an essential part of the human diet in most parts of the world; On the other hand, the industrialization of societies has led to pollution of the environment, including heavy metal contamination of soil and water, which negatively affects rice production and quality. Therefore, finding ways to increase the yield and quality of this strategic crop seems essential. Several studies have been conducted in recent decades to find effective and inexpensive solutions to reduce the adverse effects of heavy metals in rice fields. Due to the negative effect of cadmium pollution on rice More >

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Syed Ali Zafar^1,*, Muhammad Aslam², Haroon Zaman Khan³, Sehrish Sarwar¹, Rao Saad Rehman⁴, Mariam Hassan¹, Ramala Masood Ahmad², Rafaqat A. Gill⁵, Basharat Ali⁶, Ibrahim Al-Ashkar⁷, Abdullah Ibrahim⁷, Md Atikur Rahman⁸, Ayman El Sabagh^9,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1887-1906, 2023, DOI:10.32604/phyton.2023.027679 - 11 April 2023
Abstract The availability of favorable genetic diversity is a thriving vitality for the success of a breeding program. It provides a firm basis of selecting superior breeding lines for the development of high yielding crop genotypes. In this context, present investigation aimed to generate information on genetic divergence and character association in a diversity panel of 123 local and exotic soybean genotypes. Analysis of variance revealed significant response of the evaluated genotypes based on studied attributes. It depicted the probability of selecting desirable soybean genotypes by focusing on character association studies and genetic diversity analysis. Correlation… More >

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Yeyao Du^1,#, Ye Zhang^2,#, Yang Song¹, Zhuo Zhang¹, Sujie Fan¹, Hanzhu Zhang¹, Piwu Wang^1,*
Phyton-International Journal of Experimental Botany, Vol.92, No.6, pp. 1907-1920, 2023, DOI:10.32604/phyton.2023.027607 - 11 April 2023
（This article belongs to the Special Issue: Symbiotic Associations for Nutrients Management and Complexes Formation for Better Agricultural Crops Productivity under Biotic and Abiotic Stresses)
Abstract Soybean (Glycine max (Linn.) Merr.) annual leguminous crop is cultivated all over the world. The occurrence of diseases has a great impact on the yield and quality of soybean. In this study, based on the RNA-seq of soybean variety M18, a complete CDS (Coding sequence) GmPR1L of the pathogenesis-related protein 1 family was obtained, which has the ability to resist fungal diseases. The overexpression vector and interference expression vector were transferred into tobacco NC89, and the resistance of transgenic tobacco (Nicotiana tabacum L.) to Botrytis cinerea infection was identified. The results show that: Compared with the control, the activities… More >

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